Ziyu Li
Department of Mathematics
Carl R. Woese Institute for Genomic Biology

Hi! I’m Ziyu Li, a senior at the University of Illinois Urbana-Champaign majoring in Mathematics (Data Optimization Concentration).
I’m passionate about applying novel machine learning and AI techniques to solve challenges in synthetic biology and protein engineering. I currently work as an undergraduate researcher in the Zhao Group @ UIUC, advised by Dr. Huimin Zhao, where I develop deep learning models for challenging protein engineering tasks. I am mainly focusing on protein foundation models, conditional enzyme design, and biological knowledge graph.
I am also working as a research intern in the AGI Lab @ Westlake University, advised by Dr. Chi Zhang, where I primarily focus on optimizing diffusion and flow-based models.
I’m a James Scholar and have been on the Dean’s List every semester.
Beyond academics, I serve as an Education Lead for the Illinois Data Science Club, where I design curriculum resources, organize workshops, and support members in learning data science through hands-on projects.
I am currently preparing to apply for PhD programs starting in Fall 2026. I am particularly interested in generative models and AI for science.
In my free time, I have been playing the piano for over 15 years, and you might also find me on the soccer field.
News
May 06, 2025 | I am excited to share that I will be joining the AGI Lab @ Westlake University as a visiting student, advised by Dr. Chi Zhang. |
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Apr 03, 2025 | My team won the 1st place (1/180) in the 2025 Illinois Statistics Datathon 🏅 |
Nov 04, 2024 | My team won the 2nd place (2/51) in the 2024 Sandia National Lab Data Challenge 🥈 |